Four application pipelines have been proposed in the context of the project. The pipelines, given below, are formalized using the Scufl data flow language.

===== Multiple Sclerosis image analysis pipelines =====

=== Asclepios pipeline ===

{{public_namespace:ms.xml|Multiple sclerosis pipeline}} in Scufl format
{{public_namespace:ms-wf-run.png}}

=== ViSAGeS pipeline ===

{{public_namespace:ms_irisa.xml|Multiple sclerosis pipeline}} in Scufl format
{{public_namespace:irisa-wf-run.png}}

===== Brain Stroke application pipeline (from GIN) =====

{{public_namespace:gin.xml|Brain stroke pipeline}} in Scufl format
{{public_namespace:gin-wf-run.png}}

===== Stroke / tumours Anacom application pipeline (from IFR49) =====

{{public_namespace:anacom.xml|Anacom pipeline}} in Scufl format
{{public_namespace:anacom-wf.png}}